CLAMP is Drosophila transcription factor involved in the recruitment of Dosage Compensation Complex. Spatial structure of N-terminal domain of CLAMP protein from Drosophila was studied using small-angle X-ray scattering (SAXS). This domain contains zinc-finger and adjacent amino-acid sequence with unknown structure. Earlier dimerization activity and binding of dosage compensation complex were shown for this domain. SAXS data confirm dimer formation and provide insight into the structure of the domain, which is folded, and have compact symmetrical structure.
multimerization, small-angle X-ray scattering, chromatin
1. Kuroda M.I., Hilfiker A., Lucchesi J.C. Dosage Compensation in Drosophila-a Model for the Coordinate Regulation of Transcription. Genetics, 2016, vol. 204, pp. 435-450.
2. Hallacli E., Lipp M., Georgiev P., Spielman C., Cusack S., Akhtar A., Kadlec J. Msl1-mediated dimerization of the dosage compensation complex is essential for male X-chromosome regulation in Drosophila. Mol Cell, 2012, vol. 48, pp.587-600.
3. Kadlec J., Hallacli E., Lipp M., Holz H., Sanchez-Weatherby J., Cusack S., Akhtar A. Structural basis for MOF and MSL3 recruitment into the dosage compensation complex by MSL1. Nat. Struct. Mol. Biol., 2011, vol. 18, pp. 142-149.
4. Alekseyenko A.A., Ho J.W., Peng S., Gelbart M., Tolstorukov M.Y., Plachetka A., Kharchenko P.V., Jung Y.L., Gorchakov A.A., Larschan E. Sequence-specific targeting of dosage compensation in Drosophila favors an active chromatin context. PLoS Genet., 2012, vol. 8, e1002646.
5. Straub T., Zabel A., Gilfillan G.D., Feller C., Becker P.B. Different chromatin interfaces of the Drosophila dosage compensation complex revealed by high-shear ChIP-seq. Genome Res., 2013, vol. 23, pp. 473-485.
6. Straub T., Grimaud C., Gilfillan G.D., Mitterweger A., Becker P.B. The chromosomal high-affinity binding sites for the Drosophila dosage compensation complex. PLoS Genet, 2008, e1000302.
7. Larschan E., Soruco M.M., Lee O.K., Peng S., Bishop E., Chery J., Goebel K., Feng J., Park P.J., Kuroda M.I. Identification of chromatin-associated regulators of MSL complex targeting in Drosophila dosage compensation. PLoS Genet., 2012, vol. 8, e1002830.
8. Marcela M.I., Chery J., Bishop E.P., Siggers T., Tolstorukov M.Y., Leydon A.R., Sugden A.U., Goebel K., Feng J., Xia P., Vedenko.A, Bulyk M.I., Park P.J. and Larschan E. The CLAMP protein links the MSL complex to the X chromosome during Drosophila dosage compensation. Genes & development, 2013, vol. 27, pp. 1551-1556.